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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7906521 chr10:122686546 A/G 4.34E-5 396 16.25 15.13 17.67 KM Plot
LGG rs7909124 chr10:97719520 C/G 1.13E-6 407 15.47 13.75 16.6 KM Plot
LGG rs7914338 chr10:22944307 A/G 8.02E-8 407 15.7 11.57 16.47 KM Plot
LGG rs7914692 chr10:63332067 C/T 1.5E-5 400 16.12 11.3 17.88 KM Plot
LGG rs7919987 chr10:63324631 T/G 1.53E-5 401 16.27 11.05 17.88 KM Plot
LGG rs7920372 chr10:97615273 A/T 0.000169 404 15.05 16.27 17.88 KM Plot
LGG rs7920943 chr10:122682968 G/A 0.0002 402 16.27 15.13 17.97 KM Plot
LGG rs7922423 chr10:43464586 T/C 0.000164 385 15.6 15.23 6.83 KM Plot
LGG rs7923556 chr10:64024648 A/G 0.000143 400 12.17 15.47 15.83 KM Plot
LGG rs79238901 chr14:74351564 A/G 0 406 14.92 17.03 1.23 KM Plot
LGG rs79278832 chr7:56038373 G/A 1.58E-10 406 15.32 15.93 7.8 KM Plot
LGG rs7930353 chr11:2978731 C/T 0.000103 403 15.6 14.75 11.8 KM Plot
LGG rs7933882 chr11:61208885 T/C 3.06E-5 406 17.73 17.67 14.5 KM Plot
LGG rs79416314 chr17:48518437 A/G 1.76E-5 406 15.17 17.67 14.12 KM Plot
LGG rs79438555 chr5:93968492 G/T 4.34E-5 405 14.8 17.73 9.8 KM Plot